Cognitive
A synthetic tripeptide bioregulator studied in neurological and gene-expression research.
Pinealon (Glu-Asp-Arg; EDR) is a synthetic linear tripeptide belonging to the Khavinson family of short peptide bioregulators. Researchers have examined it in neuronal cell cultures, rodent models of neurological stress, and molecular-docking studies of peptide–DNA interaction. The published literature spans oxidative-stress assay systems, hypoxia and developmental paradigms, and dendritic-spine morphometry.
Type
Synthetic linear tripeptide (peptide bioregulator)
Molecular formula
C15H26N6O8
Molecular weight
~418.4 g/mol
CAS number
175175-23-2
Amino acids
3
Sequence
Glu-Asp-Arg (EDR); H-L-Glu-L-Asp-L-Arg-OH
Pinealon carries no assigned cell-surface or cytoplasmic receptor in the literature. The proposed mode of action is receptor-independent: direct interaction with nuclear DNA and possibly histone proteins, positioned as a transcriptional/epigenetic regulator. Biophysical studies (NMR, viscometry, molecular dynamics) characterize contacts at the N7 and O6 atoms of guanine within the DNA major groove, with divalent Mg²⁺ reported to facilitate binding by screening the phosphate backbone. Molecular-docking analyses map candidate binding sites on promoter sequences of genes including TPH1, SOD2, GPX1, CASP3, PPARA, and PPARG. Cellular readouts measured in culture models include reactive-oxygen-species accumulation, MAPK/ERK1/2 phosphorylation kinetics, cell-cycle phase distribution, antioxidant-enzyme expression (SOD2, GPX1), and pro-apoptotic markers (caspase-3, p53).
Research Focus
Studied in neuronal culture models, rodent CNS-stress paradigms, and molecular-docking analyses of peptide–DNA interaction.
Pinealon is classified as a short peptide bioregulator — a class of synthetic tripeptides conceptually derived from tissue-specific polypeptide preparations (in this case, the CNS-derived preparation Cortexin). Unlike classical receptor ligands, it carries no defined cell-surface or cytoplasmic receptor in the published literature. The proposed mechanism, advanced across reports from Khavinson and colleagues, involves direct interaction with nuclear DNA and possibly histones, positioning gene-transcription regulation as the operative level. Biophysical work by Silanteva et al. (2019) examined the interaction of the EDR tripeptide with double-stranded DNA using spectroscopy, NMR viscometry, and molecular-dynamics simulation, characterizing contacts primarily at guanine N7 and O6 atoms within the major groove, with divalent Mg²⁺ ions facilitating interaction through phosphate-backbone screening. Separately, docking analyses (Khavinson, Lin'kova, Tarnovskaya, 2016; Khavinson et al., 2021) proposed sequence-specific binding to promoter regions of candidate genes including TPH1, PPARA, PPARG, CASP3, SOD2, and GPX1. These biophysical and computational findings constitute the mechanistic framework; orthogonal wet-lab confirmation (ChIP, EMSA, structural biology) has not yet been reported outside modeling and limited biophysics.
The foundational in vitro dataset was reported by Khavinson et al. (2011), using rat cerebellar granule cells, neutrophils, and PC12 pheochromocytoma cells exposed to receptor-dependent (ouabain, homocysteine) and non-receptor (hydrogen peroxide) oxidative challenge. The study employed fluorescence-based ROS measurement, propidium-iodide exclusion for necrotic-cell assessment, ERK1/2 phosphorylation kinetics by western analysis, and flow-cytometric cell-cycle profiling. A related aging brain-cortex culture study (Khavinson et al., 2014) investigated serotonin expression alongside TPH1-promoter docking predictions in an age-context model, using the Glu-Asp-Arg tripeptide together with the structurally distinct Lys-Glu-Asp tripeptide.
Two experimental lines investigated Pinealon in synaptic-structure contexts. Kraskovskaya et al. (2017) used primary mouse hippocampal neurons exposed to amyloid synaptotoxicity and measured mushroom-spine density as the morphometric endpoint; a published correction was subsequently issued for that paper (2017). A study by Khavinson et al. (2021), conducted in the 5xFAD transgenic mouse line (B6SJL-Tg(APPSwFlLon,PSEN1*M146L*L286V)6799Vas), examined CA1 secondary-dendrite spine density alongside molecular-docking predictions of candidate promoter binding; a 2025 published correction noted a figure-duplication error in that work, with the authors stating that the scientific conclusions were unaffected. A separate investigation (Khavinson et al., 2017) assessed striatal-neuron spine morphology in a Huntington's-disease mouse model; this study appeared in a non-PubMed-indexed venue.
Several rodent paradigms examined Pinealon alongside behavioral and neurochemical endpoints. Arutjunyan et al. (2012) used a prenatal maternal methionine-load protocol to induce hyperhomocysteinemia, then assessed offspring using the Morris water-maze and cerebellar-neuron oxidative-stress endpoints (ROS accumulation, propidium-iodide cell death). Hypoxia-model studies — including acute hypoxic hypoxia in aged rats — assessed antioxidant-enzyme activity, caspase-3, and Morris-maze acquisition and retention measures (Khavinson et al., 2014, 2015); one aged-rat study combined Pinealon with the polypeptide preparation Cortexin in both hypoxia and hypothermia conditions. Karantysh et al. (2020) examined Pinealon in the streptozotocin-diabetes rat model using Morris-maze retention and hippocampal NMDA-receptor subunit gene expression measured by real-time PCR as endpoints.
The published body of work is modest in size and substantially concentrated in research groups affiliated with the St. Petersburg Institute of Bioregulation and Gerontology, with V.Kh. Khavinson and N.S. Linkova as recurring authors across primary studies and reviews. Independent, non-affiliated replication is essentially absent from the indexed literature. Several primary papers and reviews appear in lower-impact or Russian-language journals, and one paper on striatal-neuron morphology was published in a non-PubMed-indexed venue. A widely circulated vendor PMID (23199282) is a documented misattribution — that identifier refers to an unrelated publication — and is therefore excluded from this reference set. No registered clinical trial was identified in ClinicalTrials.gov or the WHO International Clinical Trials Registry Platform for this compound. Human observations referenced in review articles and patent literature are non-indexed descriptions, not independently verified trial records, and are not listed as clinical citations here.
Lyophilized
-20°C long term
0–4°C short term.
Reconstituted
2–8°C
use within days to weeks; avoid freeze-thaw.
Hygroscopic short peptide; protect from light and moisture.
Reviews
Khavinson VKh, et al. (2022). International Journal of Molecular Sciences — Review of neuroepigenetic mechanisms of short peptides in Alzheimer's-disease research models
Khavinson VKh, Linkova NS, et al. (2021). Molecules — Systematic review of short-peptide regulation of gene expression via DNA and chromatin interaction
Khavinson VKh, Linkova NS, Kozhevnikova EO, Trofimova SV. (2021). Molecules — Review of EDR-peptide gene-expression mechanism in an Alzheimer's-disease research context
Primary research
Khavinson VKh, et al. (2021). Pharmaceuticals (Basel) — Mouse 5xFAD Alzheimer's-model study examining dendritic-spine morphology and candidate-promoter docking
Khavinson VKh, et al. (2025). Pharmaceuticals (Basel) — Published correction to the 2021 5xFAD mouse study (figure-duplication error noted; conclusions stated unaffected)
Karantysh GV, et al. (2020). Neurochemical Journal — Rat streptozotocin-diabetes study of Pinealon with Morris-maze behavioral endpoints and hippocampal NMDA-receptor subunit gene expression by RT-PCR
Silanteva IA, et al. (2019). Journal of Physical Chemistry B — Biophysical study of EDR-tripeptide interaction with double-stranded DNA using spectroscopy, NMR viscometry, and molecular dynamics
Kraskovskaya NA, et al. (2017). Bulletin of Experimental Biology and Medicine — In vitro hippocampal-neuron study examining tripeptide effects on mushroom-spine density under amyloid synaptotoxicity
Kraskovskaya NA, et al. (2017). Bulletin of Experimental Biology and Medicine — Published correction to the 2017 hippocampal-neuron tripeptide study
Khavinson VKh, et al. (2017). Journal of Neurology and Neuroscience — Mouse Huntington's-disease model study examining EDR-peptide effects on striatal-neuron spine morphology
Khavinson VKh, Lin'kova NS, Tarnovskaya SI. (2016). Bulletin of Experimental Biology and Medicine — Molecular-docking study of short-peptide binding to gene-expression regulatory sequences
Khavinson VKh, et al. (2015). Advances in Gerontology — Aged-rat hypoxia and hypothermia behavioral-neurochemical study of Pinealon and Cortexin
Khavinson VKh, et al. (2014). Advances in Gerontology — Aged-rat acute hypoxia study examining serum cytokines and brain caspase-3 activity with Cortexin and Pinealon
Khavinson VKh, et al. (2014). Bulletin of Experimental Biology and Medicine — Aging brain-cortex culture study examining serotonin expression and TPH1-promoter docking with short peptides
Arutjunyan AV, Kozina LS, Stvolinskiy SL, Bulygina ER, Mashkina AP, Khavinson VKh. (2012). International Journal of Clinical and Experimental Medicine — Rat prenatal hyperhomocysteinemia model examining Pinealon with offspring Morris-maze behavioral and cerebellar-neuron oxidative-stress endpoints
Khavinson VKh, et al. (2012). Bulletin of Experimental Biology and Medicine — Molecular-cellular study of peptide regulation of melatonin synthesis in rat pinealocyte culture (AANAT/pCREB context)
Khavinson VKh, et al. (2011). Rejuvenation Research — In vitro neuronal-culture study of Pinealon and ROS levels with proliferative assays in cerebellar granule cells, neutrophils, and PC12 cells
Research Use Only
These products are intended for research purposes only and are not for human consumption. Not FDA approved. Not intended to diagnose, treat, cure, or prevent any disease.